Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs34647936 chr19:19548239 T/G 0.000158 111 16.23 12.17 0 KM Plot
LAML rs34699720 chr11:119712159 C/A 6.2E-5 109 15.2 10.67 0 KM Plot
LAML rs34737515 chr2:109354326 C/CCAT 2.78E-5 105 13.1 20.3 0 KM Plot
LAML rs34767445 chr1:886186 C/CAG 0.000158 111 0 15.67 14.22 KM Plot
LAML rs34827266 chr13:71368823 T/TG 1.89E-5 110 0 5 16.27 KM Plot
LAML rs34868389 chr6:127670625 A/AC 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs34877889 chr1:114396369 T/A 0.000117 110 13.1 23.3 5.6 KM Plot
LAML rs34881322 chr19:19531307 A/AT 0.000184 106 16.3 9.1 0 KM Plot
LAML rs35069622 chr6:127653994 TG/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs35073197 chr4:16041979 G/T 0.000109 111 15.2 14.7 0 KM Plot
LAML rs35084134 chr19:12551616 C/G 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs35163144 chr11:119726313 A/G 0.000139 109 15.7 12.68 0 KM Plot
LAML rs35208084 chr10:961365 G/GA 4.43E-5 110 15.23 14.63 5.1 KM Plot
LAML rs35230135 chr19:12594206 G/A 5.31E-6 110 5.62 22.83 12.65 KM Plot
LAML rs35260284 chr7:46239452 C/T 0.000117 111 16.17 8.1 0 KM Plot